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convert between bioinformatics formats

Project description

Bioinformatics tools in Python

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note:Bioconvert is tested with Travis for the following Python version: 3.5 and 3.6. Python 2 won’t be provided.
contributions:Please join https://github.com/biokit/bioconvert
issues:Please use https://github.com/biokit/bioconvert/issues

Installation

In order to install bioconvert, you can use pip:

pip install bioconvert

Usage

convert input.fastq output.fasta
convert input.fq output.fasta
convert input.mybam output.bed --input-format bam
convert --formats
convert --help

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Filename, size & hash SHA256 hash help File type Python version Upload date
bioconvert-0.0.4.tar.gz (212.6 kB) Copy SHA256 hash SHA256 Source None

Supported by

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