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BioMAJ daemon service

Project description

# About

Microservice to manage biomaj, acts as a frontend to receive biomaj-cli commands and execute operations

Needs mongo and redis

# Development

flake8 –ignore E501 biomaj_daemon

# Run

## Message consumer:

export BIOMAJ_CONFIG=path_to_config.yml python bin/biomaj_daemon_consumer.py

## Web server

If package is installed via pip, you need a file named gunicorn_conf.py containing somehwhere on local server:

def worker_exit(server, worker):
from prometheus_client import multiprocess multiprocess.mark_process_dead(worker.pid)

If you cloned the repository and installed it via python setup.py install, just refer to the gunicorn_conf.py in the cloned repository.

export BIOMAJ_CONFIG=path_to_config.yml rm -rf ..path_to/godocker-prometheus-multiproc mkdir -p ..path_to/godocker-prometheus-multiproc export prometheus_multiproc_dir=..path_to/godocker-prometheus-multiproc gunicorn -c ../path_to/gunicorn_conf.py biomaj_daemon.daemon.biomaj_daemon_web:app

Web processes should be behind a proxy/load balancer, API base url /api/daemon

3.0.7:
Add whatsup support for non proxy config Skip bank config with errors
3.0.6:
Fix logging for monolithic setup Add whatsup option Fix prometheus stats
3.0.5:
Fix for python 2.x
3.0.4:
Fix status page with other services Add missing README in package
3.0.3:
Fix missing parameters
3.0.2:
Move options to management to utils for reuse Fix –about-me
3.0.1:
Micro service to manage biomaj updates

Project details


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