BioMASS
BioMASS is a computational framework for modeling and analysis of biological signaling systems in Python.
- Documentation: https://biomass-core.readthedocs.io
- Source code: https://github.com/biomass-dev/biomass
- Bug reports: https://github.com/biomass-dev/biomass/issues
It provides useful tools for numerical simulation, parameter estimation, network analysis, and result visualization.
Installation
The BioMASS library is available at the Python Package Index (PyPI).
$ pip install biomass
BioMASS supports Python 3.7 or newer.
Reference
Imoto, H., Zhang, S. & Okada, M. A Computational Framework for Prediction and Analysis of Cancer Signaling Dynamics from RNA Sequencing Data—Application to the ErbB Receptor Signaling Pathway. Cancers 12, 2878 (2020). https://doi.org/10.3390/cancers12102878
Author
License
1 maintainer
Metadata
1 maintainer
Release files for biomass 0.5.5
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| biomass-0.5.5.tar.gz | 71.8 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| biomass-0.5.5-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 169.3 kB
Release files / biomass-0.5.5.tar.gz
| Download URL | biomass-0.5.5.tar.gz |
|---|---|
| Size | 71.8 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
f74386d4503452a0cebdb09c3ead5b3450c0baec5f6abfab3a9473d65879ea80
|
|
BLAKE2b-256 checksum How to use checksums |
485166fddc4a58ce67d6cbe15a2d108978cf66bfad5bf7d18b24a1417b8311fb
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.7.1 importlib_metadata/4.10.0 pkginfo/1.8.2 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.3 CPython/3.8.12
|
Release files / biomass-0.5.5-py3-none-any.whl
| Download URL | biomass-0.5.5-py3-none-any.whl |
|---|---|
| Size | 97.5 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
bd4eeb2fb8d1fa8db959fa777f204d53225a2d5f56207458a4d4ae5c040c3b10
|
|
BLAKE2b-256 checksum How to use checksums |
8809d987ce616947c9c1ad1aac8b9e08c429bc45f8cff807aa3eb10c4558116f
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.7.1 importlib_metadata/4.10.0 pkginfo/1.8.2 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.3 CPython/3.8.12
|
