A feature detection LC-MS1 spectra.
Project description
biosaur2 - A feature detection LC-MS1 spectra. This project is a rewriten version of Biosaur software (https://github.com/abdrakhimov1/Biosaur).
The centroided mzML file is required for of the script.
Algorithm can be run with following command:
biosaur2 path_to_MZML
The script output contains tsv table with peptide features.
Citing biosaur2
Abdrakhimov, et al. Biosaur: An open-source Python software for liquid chromatography–mass spectrometry peptide feature detection with ion mobility support. https://doi.org/10.1002/rcm.9045
Installation
Using the pip:
pip install biosaur2
Links
- GitHub repo & issue tracker: https://github.com/markmipt/biosaur2
- Mailing list: markmipt@gmail.com
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