biosimulations-bigg 0.0.5

Command-line program for publishing the BiGG model repository to BioSimulations.

BioSimulations-BiGG

BioSimulations-BiGG provides a command-line application for publishing the BiGG model repository of flux balance models to the BioSimulations repository for simulation projects.

This command-line program is run weekly by the GitHub action in this repository.

Installation

Requirements

• Python >= 3.7

• pip

Install latest revision from GitHub

pip install git+https://github.com/biosimulations/biosimulations-bigg.git#biosimulations-bigg

API documentation

API documentation is available here.

License

This package is released under the MIT license. BiGG is licensed under the BiGG License.

Development team

This package was developed by the Karr Lab at the Icahn School of Medicine at Mount Sinai in New York and the Center for Reproducible Biomedical Modeling. BiGG was developed by the Systems Biology Research Group at the University of California, San Diego with assistance from the contributors listed here.

Contributing to BioSimulations-BiGG

We enthusiastically welcome contributions to BioSimulations-BiGG! Please see the guide to contributing and the developer’s code of conduct.

Acknowledgements

This work was supported by National Institutes of Health award P41EB023912.

Questions and comments

Please contact the BioSimulations Team with any questions or comments about this package. Please contact the BiGG Team with any questions or comments about BiGG.