- Python version:
3.7, 3.8, 3.9, 3.10
- Issues:
This tools is a simple Sniffer for Biological formats (and compression formats)
Installation
pip install biosniff
Usage
biosniff file.fasta biosniff example.vcf ...
There are about 50 formats supported for now including:
abi, bam, bai, bcf, binary_bed, bed, bedgraph, bigwig, bigbed, bplink, bz2, cram, clustal, dsrc, embl,ena, fasta, fastq, genbank, gfa, gff2, gff3, gz, json, maf, newick, nexus, ods, paf, phylip, phyloxml, plink, qual, sam, scf, stockholm, rar, twobit, tsv, vcf, wiggle, wig, xls, xlsx, xmfa, yaml, zip, 7zip, xz
Changelog
Version |
Description |
|---|---|
1.0.0 |
|
0.4.0 |
|
0.3.0 |
|
0.2.0 |
|
0.1.0 |
|
1 maintainer
Metadata
1 maintainer
Release files for biosniff 1.0.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| biosniff-1.0.0.tar.gz | 94.5 kB | Details |
Release files / biosniff-1.0.0.tar.gz
| Download URL | biosniff-1.0.0.tar.gz |
|---|---|
| Size | 94.5 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
6e1a7c7343b6a99722449c99bf99c6eb5c82d51a582f25a7afcd7ea5e401d244
|
|
BLAKE2b-256 checksum How to use checksums |
c8dff26f15584340cda228d7948253184ab4501dbff47739ff296b927ee7eee0
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/4.0.1 CPython/3.7.3
|
