biotranslator 0.1.2

BioTranslator: Cross-modal Translation for Zero-shot Biomedical Classification

BioTranslator API

BioTranslator is a cross-modal translator which can annotate biology instances only using user-written texts. The codes here can reproduce the main results in BioTranslator paper, including zero-shot protein function prediction, zero-shot cell type prediction, and predict the nodes and edges of a gene pathway. BioTranslator takes a user-written textual description of the new discovery and then translates this description to a non-text biological data instance. Our tool frees scientists from limiting their analysis within predefined controlled vocabularies, thus accelerating new biomedical discoveries.

For more information, feel free to visit the project's main repository here.