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A library for atlaskb data models

Project description

Brain Knowledge Base Interaction Toolkit

This package contains Pydantic version of the BICAN Knowledgebase Data Models, along with tools to interact with the models and the data they represent.

This project is still under development, and we encourage everyone to provide feedback and join the project.

Models

All models are located in the models directory. Currently, we support the following models:

Tools to interact with the models

Installation

Installation from PyPI

pip install bkbit

Temporary fix: updating to new schemasheets version from GitHub:

pip install git+https://github.com/linkml/schemasheets

Instructions for developers:

  • Fork the repository
  • Clone your fork
  • Navigate to the main project directory: cd bkbit
  • Install in editable mode: pip install -e .[all]
  • Install newer version of schemasheets (temporary fix): pip install git+https://github.com/linkml/schemasheets

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