LCMS Processing tools used by the Metabolomics Platform at the Broad Institute.
Project description
BMXP - The Metabolomics Platform at the Broad Institute
pip install bmxp
This is a collection of tools we use daily for processing our data. Each tool performs a step in our processing workflow. Currently, we have published
- Eclipse - Align two or more same-method nontargeted LCMS datsets.
- Gravity - Cluster redundant LCMS features based on RT and Correlation (And someday, XIC shape)
In the future we will add:
- Blueshift - Drift Correction via pooled technical replicates and internal standards
- Rawfilereader - C-optimized LCMS raw file reader for exploring raw files and formatting MS2
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bmxp-0.0.11.tar.gz
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