Skip to main content

Build clade HMMs from a multiple sequence alignment file

Project description


Build per-clade pHMM models from a collection of aligned protein sequences (in a multifasta format).

Clades are programmatically defined by cutting a mid-rooted, laderized, and ultrametricized phylogenetic tree of the aligned sequences by a specified length point.


Usage under construction

Project details

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

build_subpfam-0.1.1.tar.gz (4.2 kB view hashes)

Uploaded source

Built Distribution

build_subpfam-0.1.1-py3-none-any.whl (18.5 kB view hashes)

Uploaded py3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page