`calibr8`

This package provides templates and functions for performing likelihood-based calibration modeling. To see implementation examples & excercises, you can go to notebooks/.

Installation

calibr8 is released on PyPI:

pip install calibr8

Documentation

Read the package documentation here.

Usage and Citing

calibr8 is licensed under the GNU Affero General Public License v3.0.

When using calibr8 in your work, please cite the Helleckes & Osthege et al. (2022) paper and the corresponding software version.

Note that the paper is a shared first co-authorship, which can be indicated by ¹ in the bibliography.

@article{calibr8Paper,
  doi       = {10.1371/journal.pcbi.1009223},
  author    = {Helleckes$^1$, Laura Marie and
  	       Osthege$^1$, Michael and
	       Wiechert, Wolfgang and
	       von Lieres, Eric and
	       Oldiges, Marco},
  journal   = {PLOS Computational Biology},
  publisher = {Public Library of Science},
  title     = {Bayesian and calibration, process modeling and uncertainty quantification in biotechnology},
  year      = {2022},
  month     = {03},
  volume    = {18},
  url       = {https://doi.org/10.1371/journal.pcbi.1009223},
  pages     = {1-46},
  number    = {3}
}

@software{calibr8version,
  author    = {Michael Osthege and
               Laura Helleckes},
  title     = {JuBiotech/calibr8: v6.5.2},
  month     = mar,
  year      = 2022,
  publisher = {Zenodo},
  version   = {v6.5.2},
  doi       = {10.5281/zenodo.4127012},
  url       = {https://doi.org/10.5281/zenodo.4127012}
}

Head over to Zenodo to generate a BibTeX citation for the latest release.

Metadata

Release files for calibr8 7.3.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for calibr8 7.3.0
File	Size	Uploaded
calibr8-7.3.0.tar.gz	43.7 kB	May 18, 2026	Details

Built distribution (wheel)

Table of built distributions (wheels) for calibr8 7.3.0
File	Interpreter	ABI	Platform	Reset
calibr8-7.3.0-py3-none-any.whl 46.2 kB May 18, 2026	Python 3	none	any	Details

Total release size: 90.0 kB

Release files / calibr8-7.3.0.tar.gz

Download URL	calibr8-7.3.0.tar.gz
Size	43.7 kB
Tags	Source
SHA-256 checksum How to use checksums	`01b35c8273965e68b71b04998413f7ddec4582262c2047f4d00dd96b4047f9ab`
BLAKE2b-256 checksum How to use checksums	`063e8b911190cabfe163c628601d6696f60648715a47dcbef4e2be7559daa339`
Upload date	May 18, 2026
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/6.2.0 CPython/3.13.13`

Release files / calibr8-7.3.0-py3-none-any.whl

Download URL	calibr8-7.3.0-py3-none-any.whl
Size	46.2 kB
Tags	Python 3
SHA-256 checksum How to use checksums	`1a39a34013e05fc2a2cc6bdd3cf737e7bc0c198696636379e8b4f44929d49097`
BLAKE2b-256 checksum How to use checksums	`53e51ccb8f5286298eaf2045bebc24e10e032eccd289fd3bc6b0795ce86caf96`
Upload date	May 18, 2026
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/6.2.0 CPython/3.13.13`