causal-inference-population-dynamics 0.0.2.dev13

Library to conduct experiments in population dynamics.

Population dynamics

Library to conduct experiements on population dynamics.

Installation

1. To generate required log and results directories, run

bash init.sh

2. Create conda environment

conda env create -f environment.yml

3. Activate the environment

conda activate population-dynamics

4. Install causal as a package within the environment

python setup.py develop

Running the Lotka-Volterra simulation

• The Lotka-Volterra simulator class exists in repo/causal/base/lotka_volterra.py.

• The Lotka-Volterra simulation parameters are fetched from repo/causal/config.py. You can edit the config.py file directly to play around with the parameter values.

• You can run the simulator directly from terminal by running

python causal/base/lotka_volterra.py

• The simulation statistics will be saved in the repo/results directory.