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Count Blood Cells

Project description

Count Blood Cells

Count red, white blood cells to detect various diseases such as blood cancer (leukemia), lower red blood cells count (anemia)...

Sample

Table of Contents

Project Structure

cbc/
|-- data/
|   |-- plt/...
|   |-- rbc/...
|   |-- wbc/...
|
|-- docs/...
|
|-- models/...
|
|-- output/
|   |-- plt/...
|   |-- rbc/...
|   |-- wbc/...
|
|-- AUTHORS
|-- cbc
|-- LICENSE
|-- README.md
|-- TODO.md
|-- requirements.txt 
|-- setup.py

Install

  • Install straight from PyPI using pip:
$ pip install cbc

Usage

Please read cbc --help before using it -o flag is optional (defaults to out/ directory)

  • Count blood cells (-r for red and -w for white):
$ cbc -r <blood-cell-image>
  • Predict blood cell image:
$ cbc predict -r <blood-cell-image>
  • Train a new model:
$ cbc train -r <model-name>

Develop

  • Download the project:
$ git clone https://github.com/nemo256/cbc
$ cd cbc 
  • Activate virtual environment:
$ python -m venv venv
$ source venv/bin/activate
$ pip install -r requirements.txt
  • Now just adapt the code to your need and then run using the command:
$ chmod +x cbc
$ ./cbc

License

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