A program used to detect Cryptic Exon.
Project description
ce_detector
A program used to detect Cryptic Exon
Free software: MIT license
Documentation: https://ce-detector.readthedocs.io.
Features
Detect Junction Reads
Annotate Junction Reads
Detect Cryptic Exon
Installation
Using pip:
$ pip install ce-detector
Using conda:
$ conda install ce-detector
Usage example
_For more examples and usage, please refer to Document
Development setup
Describe how to install all development dependencies and how to run an automated test-suite of some kind. Potentially do this for multiple platforms.:
$ pip install -r requirement_dev.txt
Contributing
Fork it (<https://github.com/cauliyang/ce_detector/fork>)
Create your feature branch (git checkout -b feature/fooBar)
Commit your changes (git commit -am ‘Add some fooBar’)
Push to the branch (git push origin feature/fooBar)
Create a new Pull Request
Credits
This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.
History
0.1.0 (2020-12-26)
First release on PyPI.
Project details
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
File details
Details for the file ce-detector-0.2.1.tar.gz
.
File metadata
- Download URL: ce-detector-0.2.1.tar.gz
- Upload date:
- Size: 21.5 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.3.0 pkginfo/1.7.0 requests/2.25.1 setuptools/52.0.0 requests-toolbelt/0.9.1 tqdm/4.56.0 CPython/3.8.7
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | dbc40ce084f5b96367ad79bdbbd526349880ae5498bbb45e4bcd87a7598dc523 |
|
MD5 | 633500fc9ba7e9ac5366c7a03ad277b3 |
|
BLAKE2b-256 | a975fa995fc1dcdde866a4cd0b4021524955fc74443e41ec393e9b1631a44806 |
File details
Details for the file ce_detector-0.2.1-py2.py3-none-any.whl
.
File metadata
- Download URL: ce_detector-0.2.1-py2.py3-none-any.whl
- Upload date:
- Size: 15.9 kB
- Tags: Python 2, Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.3.0 pkginfo/1.7.0 requests/2.25.1 setuptools/52.0.0 requests-toolbelt/0.9.1 tqdm/4.56.0 CPython/3.8.7
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | 004f03e95f36e0bb054e616edc9e4f9341e896e59b39e4d9a19e7dacb1021c12 |
|
MD5 | 61513727082d6240a7abc1ebb61862de |
|
BLAKE2b-256 | 549474036e6e8a6c9baf2b02d139e2784bcfb15de3fcc25df4a6b6e55372586a |