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A program used to detect Cryptic Exon.

Project description

ce_detector

https://img.shields.io/pypi/v/ce_detector.svg https://travis-ci.com/cauliyang/ce_detector.svg?token=ny2TT3zEDqv1DqKs8ocf&branch=master Documentation Status

A program used to detect Cryptic Exon

Features

  • Detect Junction Reads

  • Annotate Junction Reads

  • Detect Cryptic Exon

Installation

Using pip:

$ pip install ce-detector

Using conda:

$ conda install ce-detector

Usage example

_For more examples and usage, please refer to Document

Development setup

Describe how to install all development dependencies and how to run an automated test-suite of some kind. Potentially do this for multiple platforms.:

$ pip install -r requirement_dev.txt

Contributing

  1. Fork it (<https://github.com/cauliyang/ce_detector/fork>)

  2. Create your feature branch (git checkout -b feature/fooBar)

  3. Commit your changes (git commit -am ‘Add some fooBar’)

  4. Push to the branch (git push origin feature/fooBar)

  5. Create a new Pull Request

Credits

This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.

History

0.1.0 (2020-12-26)

  • First release on PyPI.

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