cellnopt.core 0.4.0

Functions to manipulate graph in the context of signalling pathways

The package cellnopt.core provides tools to manipulate signalling pathways. It provides I/O functions for SIF, MIDAS, SOP formats and a convenient graph data structure.

Here is a simple example that creates a graph and plots it using dot/graphviz:

from cellnopt.core import *
c = CNOGraph()
c.add_reaction("A=B")
c.add_reaction("A+B=C")
c.plotdot()

For a full documentation, see the sphinx documentation in the ./doc directory.