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Pre-release

This release is a pre-release and may not be stable for production use.

⚠️ cfutils is deprecated — use sanger

cfutils has been renamed to sanger.

This PyPI package is a thin, unmaintained compatibility shim. It exists for two reasons only:

  1. So pip install cfutils still works and automatically installs sanger (declared as a hard dependency).
  2. To keep the cfutils name reserved on PyPI so it isn't squatted.

It contains no real code. It re-exports the full sanger public API so that existing scripts that do import cfutils or from cfutils.cli import ... keep running, but you should migrate.


Migrate

pip install sanger           # the real package
pip uninstall cfutils        # drop the shim when you're ready

In code:

# before                    # after
import cfutils              import sanger
from cfutils.show import *  from sanger.show import *

When you import cfutils you will see a DeprecationWarning pointing you to sanger.

ABI / CLI

  • The cfutils console script still works and simply calls sanger's CLI:
    cfutils --help     # identical to `sanger --help`
    

Install

pip install cfutils   # -> also installs sanger

Release notes

  • 0.0.0.dev62 — republished as a deprecation shim depending on sanger>=0.1.5. Previous real release: 0.0.0.dev61.

Metadata

Release files for cfutils 0.0.0.dev62

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