Package to model dose response dynamics
Project description
Chi
About
Chi is an open source Python package hosted on GitHub, which can be used to model dose response dynamics.
All features of our software are described in detail in our full API documentation.
Getting started
Installation
- Install CVODES
Chi uses the open-source package Myokit to solve mechanistic models and compute their sensitivities efficiently. Myokit does this using CVODESS, which need to be installed with:
- On Ubuntu:
apt-get install libsundials-dev
- On MacOS:
brew install sundials
- On Windows: No action required. Myokit will install CVODESS automatically.
- Install chi
pip install chi-drm
Usage
You can now use chi's functionality by importing it
import chi
Tutorials and more detailed explanations on how to use chi are currently under development.
Contributing
Pull requests are welcome. For major changes, please open an issue first to discuss what you would like to change.
Please make sure to update tests as appropriate.
License
Download files
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