Genetic circuit design using Monte Carlo tree search
Project description
CircuiTree
Genetic circuit design using Monte Carlo tree search
Installation
From a package repository
[Installation with pip
/conda
is not yet supported]
From the GitHub repository
To install and use circuitree
from the GitHub source code, first clone the repo into a directory.
git clone https://github.com/pranav-bhamidipati/circuitree.git[ dir_name]
Then, enter the directory and build the environment using the command-line tool poetry
. Instructions for installation can be found here. by running poetry install
. This will install a virtual environment in the virtualenv cache directory POETRY_CACHE_DIR
. To activate this environment interactively as a nested shell, run poetry shell
. Alternatively, you can run a command in the virtual environment with poetry run <command>
.
For instance, to launch a Jupyter notebook with circuitree
pre-loaded, run poetry run jupyter notebook
.
Usage
See the quick-start demo.
Project details
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