ckanext-query-dois 2.1.1

A CKAN extension that creates DOIs for queries on resources.

ckanext-query-dois

A CKAN extension that creates DOIs for queries on resources.

Overview

This extension creates (mints) digital object identifiers (DOIs) for queries on resources. By recording the query parameters used and the exact version of the data at the time of the query, this allows precise retrieval of the data as it looked when the DOI was minted.

Must be used in conjunction with the ckanext-versioned-datastore.

Optionally: ckanext-ckanpackager can be used to get DOIs for downloads (query-dois automatically hooks into the ckanext-ckanpackager interface if it finds the plugin is active in the running CKAN environment).

You will need an account with a DataCite DOI service provider to use this extension.

Installation

Path variables used below:

• $INSTALL_FOLDER (i.e. where CKAN is installed), e.g. /usr/lib/ckan/default
• $CONFIG_FILE, e.g. /etc/ckan/default/development.ini

1. Clone the repository into the src folder:

cd $INSTALL_FOLDER/src
git clone https://github.com/NaturalHistoryMuseum/ckanext-query-dois.git

2. Activate the virtual env:

. $INSTALL_FOLDER/bin/activate

3. Install the requirements from requirements.txt:

cd $INSTALL_FOLDER/src/ckanext-query-dois
pip install -r requirements.txt

4. Run setup.py:

cd $INSTALL_FOLDER/src/ckanext-query-dois
python setup.py develop

5. Add 'query_dois' to the list of plugins in your $CONFIG_FILE:

ckan.plugins = ... query_dois

6. Initialise database tables

ckan -c $CONFIG_FILE query-dois initdb

Configuration

These are the options that can be specified in your .ini config file.

[REQUIRED]

Name	Description	Options
ckanext.query_dois.prefix	Prefix to use for the new DOIs
ckanext.query_dois.datacite_username	Datacite account username
ckanext.query_dois.datacite_password	Datacite account password
ckanext.query_dois.doi_title	Template string for the DOI title: takes count as a format argument
ckanext.query_dois.publisher	DOI publisher name

Other options

Name	Description	Options	Default
ckanext.query_dois.test_mode	Enable/disable using test DOIs (i.e. not creating real DOIs)	True/False	True

Further Setup

This extension will only work if you have signed up for an account with DataCite.

Usage

Commands

initdb

Initialises the database table.

1. initdb: initialise the database model

   ckan -c $CONFIG_FILE query-dois initdb
   

Testing

Test coverage is currently extremely limited.

To run the tests in this extension, there is a Docker compose configuration available in this repository to make it easy.

To run the tests against ckan 2.9.x on Python3:

1. Build the required images

docker-compose build

2. Then run the tests. The root of the repository is mounted into the ckan container as a volume by the Docker compose configuration, so you should only need to rebuild the ckan image if you change the extension's dependencies.

docker-compose run ckan

The ckan image uses the Dockerfile in the docker/ folder which is based on openknowledge/ckan-dev:2.9.