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Closed Loop, Electrophysiology, and Optogenetics Simulator: testbed and prototyping kit

Project description

cleosim: Closed Loop, Electrophysiology, and Optogenetics Simulator

Test and lint Documentation Status

Hello there! This package has the goal of making it easy to simulate electrode recording, optogenetics, and real-time input and output processing with the Brian 2 spiking neural network simulator. While cleosim was created to facilitate prototyping closed-loop control experiments, we hope the electrode and optogenetics components will be useful outside this scope for the broader community of Brian users.

This package was developed by Kyle Johnsen and Nathan Cruzado under the direction of Chris Rozell at Georgia Institute of Technology.

Installation

Just use pip:

pip install cleosim

Usage

Read the docs!

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