cno 0.0.3

Access to Biological Web Services from Python

Coming soon.

Meanwhile, have a look at

• www.cellnopt.org for the context

• https://pypi.python.org/pypi/cellnopt.core for the main code

and those notebooks

• http://nbviewer.ipython.org/github/cokelaer/bioservices/blob/master/doc/source/notebook/BioModels.ipynb

• https://github.com/cokelaer/euroscipy_proceedings/blob/master/papers/cokelaer/cokelaer.rst

To be provided:

• [ ] pre-processing tools

• [ ] boolean analysis

• [ ] discrete time analysis

• [ ] fuzzy analysis

• [x] connection to cnor feeder connection

• [ ] ode analysis

• [ ] Visualisation

• [ ] data : move cellnopt.data into here

• [ ] move cellnopt.admin to here ?

• [ ] move cellnopt.core as cellnopt.io in here ? - [x] midas - [x] sif/reactions - [ ] cnograph - [ ] normalisation - [ ] compression - [ ] mapback - [ ] models - [x] cna

• [ ] R packages available - [x] boolean T1 - [x] boolean T2 - [ ] fuzzy - [ ] discrete time - [ ] ode