Skip to main content


Project description

# COBRA utils

[![PyPI version](]( [![DOI](](

This is a series of utilities to use together with [COBRApy]( The goal of this tool is to make easier the usage of COBRApy.

## Installation

To install this package from a Unix OS, run:

` pip install cobra-utils `

To install this package from Windows, run: ` python -m pip install cobra-utils `

In case you downloaded the source code, in a Unix OS run:

` pip install -e . `

or in Windows: ` python -m pip install -e . `

## Examples * [Loading a model and retrieving reactions information](./notebooks/Ecoli_Rxn_Information.ipynb) * [Reporter metabolites from differential expression in two strains of E. coli](./notebooks/Ecoli_Reporter_Metabolites_Pathways.ipynb)

Project details

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for cobra-utils, version 0.3.1
Filename, size File type Python version Upload date Hashes
Filename, size cobra_utils-0.3.1-py3-none-any.whl (12.8 kB) File type Wheel Python version py3 Upload date Hashes View

Supported by

AWS AWS Cloud computing Datadog Datadog Monitoring DigiCert DigiCert EV certificate Facebook / Instagram Facebook / Instagram PSF Sponsor Fastly Fastly CDN Google Google Object Storage and Download Analytics Pingdom Pingdom Monitoring Salesforce Salesforce PSF Sponsor Sentry Sentry Error logging StatusPage StatusPage Status page