Dynamic functional connectivity toolbox for multiverse analysis
Project description
Comet - A dynamic functional connectivity toolbox for multiverse analysis
Important notes
- This package is at an early stage of development, with frequent changes being made. If you intend to use this package at this stage, please feel free to contact me via the email address in the
pyproject.toml
file. - Some features are not yet tested, so there will be bugs (the question is just how many).
Installation and Usage
Please refer to the documentation for comprehensive installation and usage instructions.
It is recommended to use a dedicated Python environment (e.g. through conda) to mitigate the risk of potential version conflicts. Installation is possible through the Python Package Index (PyPI) or from the source code in this repository:
pip install comet-toolbox
Usage of the toolbox is then possible through either the GUI:
comet-gui
or (for more versatile usage) through the scripting API. For this, demo scripts are provided as starting points:
- Demo script for calculating dFC
- Demo script for performing multiverse analysis
- Demo script for multiverse analysis example from the preprint (+ additional visualizations)
- Demo script for graph analysis
Current Features
Functional Connectivity | Graph Analysis | Multiverse Analysis |
---|---|---|
Continuous
|
Optimized implementation
|
Simple Definition
|
Project details
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