A Python library for creating comutation plots to visualize genomic information
Project description
CoMut
CoMut is a Python library for creating comutation plots to visualize genomic information.
Installation
CoMut can be installed via pip
:
pip install comut
Quickstart
There is a Quickstart notebook that can create comut plots quickly with only input data. Simply download the notebook, specify the path to your data, and run the cells to produce a basic comut.
Documentation
There is also a Documentation notebook that documentation for CoMut. It describes the fundamentals of creating comuts, and provides the code used to generate the comut above.
Dependencies
CoMut runs on python 3.7 or later. CoMut requires the following packages as dependencies (they will be installed along with CoMut if using pip
)
numpy>=1.18.1
pandas>=0.25.3
palettable>=3.3.0
matplotlib>=3.3.1
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