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Convenient Interface to Inverse Ising (ConIII)

Project description

Python 3 package for solving the inverse maximum entropy problem with a focus on the pairwise maximum entropy model, also known as the inverse Ising problem.

See GitHub page for overview on how to install and use package. Directions for massive speed up of Metropolis sampling with C++ are also available there.

Examples are included in the Jupyter notebook “usage_guide.ipynb” and the Python script “usage_guide.py” (see GitHub). An overview for version 1 is also published in the [paper](https://github.com/eltrompetero/coniii/blob/py3/guide/guide.pdf).

Authors: Edward D. Lee, Bryan C. Daniels

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