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A package to facilitate interactive construction of queries to the Copernicus Data Space Ecosystem repository.

Project description

Copernicus API

This module is designed to facilitate interaction with the Copernicus Data Space Ecosystem APIs (specifically the OData API). It offers the user a Pythonic interface to interactively construct and send queries, and retrieve and organize the API responses. It takes away much of the complexity and pitfalls involved in the process of creating API calls.



Known bugs and limitations

  • Currently, only the ODATA API is supported. Support for the STAC API may follow in the future, however, at this time (late 2024), the STAC API is not yet final and feature-complete.


1. Installation

The copernicusapi package can be installed via pip using the following command:

pip install copernicusapi

2. Usage

At the core of this package is the QueryConstructor class that facilitates creation of queries to the Data Space OData Catalog API. Please refer to the documentation for details on API options and behavior.

Each method of the CopernicusQueryConstructor class adds a different type of filter to a query for a step-wise construction of the full query string. The filters can be combined in any order as needed. A full list of all options is provided under Filter methods.

At any stage in the process, the current query can be obtained via the query property. The current query settings (as provided by the user and used to construct the query) can be accessed via the property query_settings. The results of the latest call of send_query() are also accessible via the products and api_response properties.

IMPORTANT: All filter methods usually overwrite any previously defined settings. This means that calling, for example, the add_collection_filter method a second time will simply remove the previous filter and replace it with the new one. The add_attribute_filter method is the only method that can be applied multiple times with different settings. Due to the way the API is designed, all filters are always combined via boolean AND.

2.1 Initialization

The CopernicusQueryConstructor class can be initialized without any arguments.

from copernicusapi import QueryConstructor

query_constructor = QueryConstructor()

There is also the option of an interactive mode, where the current query is automatically sent to the API after any method is called, retrieving the number of products in the query and returing the products count as indicated by the API (see check_query() below). This helps avoid errors in the query since a faulty query will become evident immediately after each method call. However, this may also slow down the process and cause many superfluous calls to the API.

There are also some additional settings that affect the behavior of the query process: max_retries determines how many times failed API requests are repeated. This is important since the Copernicus API may occasionally be down or unresponsive. The request_timeout parameter determines how long a single API request is allowed to take before timing out. These settings should usually be left at their default values. Lastly, the decimals parameter determines the coordinate precision in AOI filters (i.e. the number of decimal places of coordinate values). The default is 6, which is sufficient in most cases.

NOTE: For complex AOIs with many vertices, the query string can get very long and may exceed the maximum allowed string length when using higher coordinate precision. Cutting off superfluous decimals by reducing the decimals value can alleviate that. If very high precision is required, one can increase the decimals parameter up to whatever the precision of the original AOI is.

2.2 A standard query for Sentinel-2 L2A products

As a simple example, a query for Sentinel-2 L2A products is constructed below. Four methods are needed for this.

from shapely.geometry import Polygon

# define AOI
aoi = Polygon([(9.43111261, 50.16247502),
               (10.83966524, 50.16247502),
               (10.83966524, 48.43995062),
               (9.43111261, 48.439950626),
               (9.43111261, 50.16247502)])

# define the collection
query_constructor.add_collection_filter('sentinel-2')

# define product type
query_constructor.add_product_type_filter('l2a')

# define AOI via a shapely geometry Point or Polygon in WGS84 (optionally, 
# decimal precision can be provided here as well)
query_constructor.add_aoi_filter(aoi)

# define the timeframe based on sensing start date
query_constructor.add_sensing_start_date_filter(datetime(2023, 7, 5), datetime(2023, 8, 25))

IMPORTANT:

  1. The way collections and product types can be defined is very flexible, and the process supports many aliases for the default collection and product type names. Currently, all Sentinel and Landsat, as well as many additional collections are supported. Please refer to Collection and product type names for a full overview.
  2. AOIs are expected to be shapely geometries (esp. Point, Polygon or MultiPolygon) or lists of such geometries, in WGS84 (EPSG:4326). Other reference systems are not supported. All geometries other than single Point or Polygon objects will be converted to a single (Multi)Polygon via unary_union.
  3. All date filters (publication date, sensing start date, sensing end date) can be defined via datetime.datetime objects or time strings in the format YYYY-MM-DDThh:mm:ss.000Z (the last three zeros representing milliseconds).

2.3 Filter by cloud cover

It is possible to filter by maximum cloud cover or a range of cloud cover percentage.

# search for products with a cloud cover <= 25%
query_constructor.add_cloud_cover_filter(25)

# search for products with a cloud cover between 10% and 22.5%
query_constructor.add_cloud_cover_filter((10, 22.5))

2.4 Check query

The check_query() method sends the query in its current form to the OData API and checks if any errors or exceptions occur. It returns the number of products in the query. This method is also automatically called when setting interactive=True during initialization.

IMPORTANT: This method does not retrieve all results. For this, use the send_query() method instead (see next example).

NOTE: Since check_query() is much faster and light-weight, esp. for queries resulting in large numbers of matching products, it is recommended to call check_query() before calling send_query(). This way, you can see how many products match the current search and potentially narrow it down.

# Assuming the query has been constructed following the previous examples
n_products = query_constructor.check_query()
print(n_products)

-> Out: 14

2.5 Send query

Other than check_query(), the send_query() method retrieves all results from the query to the OData API, and allows for use of the keyword arguments skip (skipping the first N entries), n_entries (return first N items in the results) and orderby (order results). For details please refer to the ODATA API Documentation.

This method returns two objects: a gpd.GeoDataFrame containing all products in the query result arranged in a table with some additional columns (see also Products GeoDataFrame for details), and the original "raw" API response JSON dict object. These outputs are also accessible via the products and api_response properties.

products, result = query_constructor.send_query()

-> Out: Retrieved 14 products (13.83 GB, 100.00% online).

The information about the total size (13.83 GB in the example above) is calculated from the ContentLength information provided by the API for each product. Unfortunately, these values are not available for all products. Thus, the value given here should only be considered to be an estimate.

IMPORTANT: The send_query() method will always retrieve the full list of products matching the query, even if the result contains 1000s of items that must be downloaded in batches (happens automatically in the background). If your query results in a very large number of matching products, the process may take quite long. It is therefore recommended to call check_query() first and potentially narrowing down the search before calling send_query().

NOTE: Once a query was sent (and if an AOI was set previously), one can use the property aoi_coverage to see the total AOI coverage of all products in the current query as a fraction. This can be used to confirm if the entire study area is covered by at least one product in the result.

2.6 Filter by attribute

For even more detailed control, one can also filter by any of the attributes available for the products via the add_attribute_filter method. This is the only method that can be applied multiple times with different settings. It is a generic interface to applying arbitrary attribute filters and is a bit more low-level than the other methods. It takes the name of the attribute, the logical operator used in the comparison (supported: eq, lt, le, gt, ge), the value of the attribute that should be present, and the attribute type (string, integer, double, datetimeoffset). Please refer to the API documentation for details.

NOTE: The add_attribute_filter method will not accept the cloudCover and productType attributes. Please use the corresponding methods instead.

# Example of filtering by "orbitDirection" (available in Sentinel-1 products)

# default method call
query_constructor.add_attribute_filter('orbitDirection', 'eq', 'ASCENDING', 'string')

# detailed keyword-based method call
query_constructor.add_attribute_filter(name='orbitDirection', 
                                       operator='eq',
                                       value='ASCENDING',
                                       attribute_type='string')

2.7 Query by product names

As an alternative to the query construction process, one can also directly query for specific products by name via the query_by_name() method. The only parameter is a list of product names as str (incl. file extensions such as .SAFE).

IMPORTANT: This method is not compatible with any of the filter methods above but intended solely for use on its own.

products, result = query_constructor.query_by_name(
        ['S1A_IW_GRDH_1SDV_20141031T161924_20141031T161949_003076_003856_634E.SAFE',
         'S2A_MSIL1C_20230106T102411_N0509_R065_T32UNU_20230106T122023.SAFE'])

-> Out: Retrieved 2 products (2.37 GB, 100.00% online).

3. Technical description

3.1 Filter methods

  1. add_collection_filter: adds a filter by data collection (e.g., sentinel-2). It is not case-sensitive and supports also alternative notation such as sentinel2 or s2. See Collection and product type names for details.
  2. add_product_type_filter: adds a filter by type of product (e.g., GRD, L2A). It is not case-sensitive and also supports some alternative notations such as level2a or level-2a. See Collection and product type names for details.
  3. add_aoi_filter: adds a filter by a specific location point or polygon (area of interest). NOTE: The term "AOI" is used loosely here for any kind of geographic filter geometry.
  4. add_sensing_start_date_filter: adds a filter by the start time of the acquisition (i.e., the actual observation time; in many cases more or less equivalent to sensing end date).
  5. add_sensing_end_date_filter: adds a filter by the end time of the acquisition (i.e., the actual observation time; in many cases more or less equivalent to sensing start date).
  6. add_publication_date_filter: adds a filter by publication date of a product (i.e., the time it has been published in the data repository).
  7. add_cloud_cover_filter: adds a filter by (minimum and) maximum cloud cover (only relevant for optical products).
  8. add_attribute_filter: adds a filter by any available attribute (NOTE: this is the only filter that can be applied multiple times).

3.2 Collection and product type names

Any collection or product type names passed to the add_collection_filter and add_product_type_filter methods will be first homogenized by converting them to lower-case and removing any white space, - and _ from the string. This means that Sentinel-2 will work just as well as sentinel-2, sentinel2 or SENTINEL 2, for example. The same is true for OL_1_EFR___, OL1EFR, OL 1 efr etc.

To further facilitate the search, most collection and product type names have aliases (see tables below). The same homogenization is applied to these as well.

Collections

Mission Collection Name Aliases
Sentinel-1 SENTINEL-1 S1
Sentinel-1 RTC SENTINEL-1-RTC S1RTC
Sentinel-2 SENTINEL-2 S2
Sentinel-3 SENTINEL-3 S3
Sentinel-5p SENTINEL-5P S5P
Sentinel-6 SENTINEL-6 S6
Copernicus Contributing Missions (CCM) CCM Copernicus Contributing Missions, Contributing Missions
Copernicus DEM COP-DEM Copernicus DEM, Cop DEM
Envisat ENVISAT -
Global Mosaics GLOBAL-MOSAICS Mosaics
Landsat-5 LANDSAT-5 L5, LS5
Landsat-7 LANDSAT-7 L7, LS7
Landsat-5 LANDSAT-8 L8, LS8
MODIS Terra/Aqua TERRAAQUA Terra, Aqua, MODIS
Sentinel-2 Global Land Cover S2GLC Global Land Cover, GLC
Soil Moisture and Ocean Salinity (SMOS) SMOS -

Product types

Mission/Sensor Product Product Type Name Aliases
Sentinel-1 Level-0 RAW (IW and EW) RAW Level-0, L0
Level-1 Single Look Complex (IW and EW) SLC Single Look Complex, Level-1 SLC, L1 SLC
Level-1 Ground Range Detected (IW and EW) GRD Ground Range Detected, Level-1 GRD, L1 GRD
Level-1 Ground Range Detected High-Resolution (IW and EW) GRDH Ground Range Detected High-Resolution, Level-1 GRDH, L1 GRDH
Level-2 Ocean OCN Ocean, Level-2, L2
Backscatter CARD-BS CARD Backscatter, Backscatter
Coherence CARD-COH6 CARD Coherence6, CARD Coherence, Coherence6, Coherence, CARD-COH
Sentinel-1 RTC Radiometric Terrain Corrected RTC Radiometric Terrain Corrected
Sentinel-2 Level-1C S2MSI1C Level-1C, L1C, TOA
Level-2A S2MSI2A Level-2A, L2A, BOA
Sentinel-3 OLCI Earth Observation Full Resolution OL_1_EFR___ EFR, OLCI EFR
Earth Observation Reduced Resolution OL_1_ERR___ ERR, OLCI ERR
Land and Atmosphere Full Resolution OL_2_LFR___ LFR, OLCI LFR
Land and Atmosphere Reduced Resolution OL_2_LRR___ LRR, OLCI LRR
Water and Atmosphere Full Resolution OL_2_WFR___ WFR, OLCI WFR
Water and Atmosphere Reduced Resolution OL_2_WRR___ WRR, OLCI WRR
Sentinel-3 SLSTR Radiance and Brightness Temperature SL_1_RBT___ RBT, SLSTR RBT
Land Surface Temperature SL_2_LST___ LST, SLSTR LST
Water Surface Temperature SL_2_WST___ WST, SLSTR WST
Fire Radiative Power SL_2_FRP___ FRP, SLSTR FRP
Sentinel-3 SRAL Level-1A SR_1_SRA_A_ SRA_A, SRAL SRA_A, L1A
Level-1B SR_1_SRA___ SRA, SRAL SRA, L1B
Level-1B-S SR_1_SRA_BS SRA_BS, SRAL SRA_BS, L1BS
Hydrology Thematic Products SR_2_LAN_HY SRAL LAN_HY, Hydrology
Sea Ice Thematic Products SR_2_LAN_SI SRAL LAN_SI, Sea Ice
Land Ice Thematic Products SR_2_LAN_LI SRAL LAN_LI, Land Ice
Land Products (not generated anymore) SR_2_LAN___ SRAL LAN, Land
Water Products (generated by the Marine Centre) SR_2_WAT___ SRAL WAT, Water
Sentinel-3 Synergy Surface Reflectance and Aerosol Parameters (over land) SY_2_SYN SYN, Synergy
VEGETATION-like 1 km product (VGT-P) - TOA Reflectance SY_2_VGP VGP, Vegetation P
VEGETATION-like 1 km product (VGT-S1) 1-day synthesis surface reflectance and NDVI SY_2_VG1 VG1, Vegetation S1
VEGETATION-like 1 km product (VGT-S10) 10-day synthesis surface reflectance and NDVI SY_2_V10 V10, Vegetation S10
Global Aerosol Parameter on super pixel resolution (4.5 km x 4.5 km) SY_2_AOD AOD, Aerosol, Aerosol Optical Depth, Optical Depth
Sentinel-5p Radiance product bands 1-8 L1B_RA_BDx RA_BDx
Irradiance product UVN module L1B_IR_UVN IR_UVN
Irradiance product SWIR module L1B_IR_SIR IR_SIR
Sentinel-6 Advanced Microwave Radiometer for Climate Level-2 MW_2__AMR____ S-6 MW_2_AMR, MW_2_AMR
Poseidon-4 Altimetry Level-1B High Resolution P4_1B_HR_____ S-6 P4_1B_HR, P4_1B_HR
Poseidon-4 Altimetry Level 1B Low Resolution P4_1B_LR_____ S-6 P4_1B_LR, P4_1B_LR
Poseidon-4 Altimetry Level-2 High Resolution P4_2__HR_____ S-6 P4_2__HR, P4_2__HR
Poseidon-4 Altimetry Level-2 Low Resolution P4_2__LR_____ S-6 P4_2__LR, P4_2__LR
Copernicus Contributing Missions (CCM) - - -
Copernicus DEM - - -
Envisat All available products (standard naming) - -
Global Mosaics Sentinel-1 IW Monthly Mosaics S1SAR_L3_IW_MCM S-1 IW monthly, S-1 IW monthly mosaic
Sentinel-1 DH Monthly Mosaics S1SAR_L3_DH_MCM S-1 DH monthly, S-1 DH monthly mosaic
Sentinel-2 Quarterly Mosaics S2MSI_L3__MCQ S-2 quarterly, S-2 quarterly mosaic
Landsat-5 Level-1 Ground L1G Level-1G, Ground, Georeferenced
Level-1 Terrain Corrected L1T Level-1T, Terrain, Terrain Corrected
Landsat-7 Level-1 Ground L1G Level-1G, Ground, Georeferenced
Level-1 Terrain Corrected L1T Level-1T, Terrain, Terrain Corrected
Level-1 Geocorrected and Terrain Corrected L1GT Level-1GT, Geocorrected Terrain, Geocorrected Terrain Corrected
Global Land Survey 1-arc second Panchromatic GTC_1P Global Land Survey, Panchromatic, Global Land Survey Panchromatic
Landsat-8 Level-1 Terrain Corrected L1T Level-1T, Terrain, Terrain Corrected
Level-1 Geocorrected and Terrain Corrected L1GT Level-1GT, Geocorrected Terrain, Geocorrected Terrain Corrected
Level-1 Precision Terrain Corrected (incl. QA Band) L1TP Level-1TP, Precision Terrain, Precision Terrain Corrected
Level-2 Surface Reflectance L2SP Level-2SP, Surface Reflectance, SR
MODIS Terra/Aqua All available products (standard naming) - -
Sentinel-2 Global Land Cover - - -
Soil Moisture and Ocean Salinity (SMOS) All available products (standard naming) - -

3.3 Products GeoDataFrame

The send_query() method returns a gpd.GeoDataFrame that contains all information that was returned by the API. Further, it contains some additional columns:

  1. aoi_coverage: fraction of the AOI covered by this product (if no AOI was defined, will be 0.).
  2. centroid: the centroid of the product footprint.
  3. checksum_blake3: the Blake3 checksum (if available).
  4. checksum_md5: the MD5 checksum (if available).
  5. cloud_cover: the cloud cover percentage (taken from product attributes, if available).
  6. download_url: the full download URL of the product.
  7. file_name: equivalent to Name column.
  8. file_size: the file size in MB (calculated from ContentLength if available).
  9. footprint_size: the total area of the footprint in km² (in Web Mercator, EPSG:3857).
  10. geometry: the footprint used as the geometry column of the GeoDataFrame.
  11. group_tile_id: a custom unique identifier of tiles (only supported for Sentinel-1/-2/-3/-5p products). This is using parts of the product name and is not to be confused with the productGroupId attribute.
  12. product_type the type of a product (taken from product attributes, if available).
  13. publication_date: publication date as a datetime.datetime/pd.TimeStamp object (obtained from PublicationDate).
  14. sensing_end_date: sensing end date as a datetime.datetime/pd.TimeStamp object (obtained from ContentDate).
  15. sensing_start_date: sensing start date as a datetime.datetime/pd.TimeStamp object (obtained from ContentDate).

IMPORTANT: Some of these columns may be empty (NaN/None) for some collections or product types. Occasionally, some of the extracted information is missing for certain products (e.g. not all products have checksums).

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