Implements 3D point cloud algorithms for estimation and fitting of shape and density profiles
Project description
CosmicProfiles is a Cython package for Point Cloud Profiling
The CosmicProfiles project
This repository provides shape and density profile analysis tools for cosmological simulations (and beyond). Its features include
overall halo shape determination, i.e. major, intermediate, minor axis vectors and shape quantities such as intermediate-to-major axis ratio or sphericity
halo shape profile determination
iterative shell-based shape profile determination algorithm for high-resolution halos
iterative ellipsoid-based shape profile determination algorithm for lower-resolution halos
user can choose between reduced shape tensor and non-reduced shape tensor
supports
‘direct’ datasets (i.e. index catalogue provided by user) and
FoF / SUBFIND halo catalogues
Gadget-style I, II and HDF5 snapshot files
all functionalities available for dark matter halos, gas particle halos and star particle halos
in addition, allows for velocity dispersion tensor eigenaxes determination
halo density profile estimation using direct binning and kernel-based approaches
user can choose between direct binning into spherical shells and
direct binning into ellipsoidal shells
density profile fitting assuming either NFW, Hernquist 1990, Einasto or alpha-beta-gamma profile model
concentration-mass relationship of halos easy to calculate
mock halo generator: ellipsoidal or spherical, compatible with the 4 density profile models
easy to interface with pynbody to work with halos identified in a cosmological simulation (see example scripts)
easy to interface with nbodykit to harness large-scale structure capabilities (see example scripts)
various profile plotting and 3D point cloud plotting tools
efficient caching capabilities to accelerate look-ups
Documentation
The documentation for CosmicProfiles is hosted on Read the Docs.
Installation and Dependencies
The easiest way to get CosmicProfiles is to install it with conda using the conda-forge channel:
conda install cosmic_profiles --channel conda-forge
Alternatively, you can use pip:
pip install cosmic-profiles
See the installation instructions in the documentation for more information.
License
Copyright 2020-2023 Tibor Dome.
CosmicProfiles is free software made available under the MIT License.
Contributions are welcome. Please raise an issue or open a PR.
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