cpg-utils 5.0.10

Library of convenience functions specific to the CPG

cpg-utils

This is a Python library containing convenience functions that are specific to the CPG.

In order to install the library in a conda environment, run:

conda install -c cpg cpg-utils

To use the library, import functions like this:

from cpg_utils.cloud import email_from_id_token

_email_string = email_from_id_token(id_token_jwt='TOKEN_STRING')

We use bumpversion for incrementing the library's semantic version. A new conda package gets published automatically in the cpg conda channel whenever a version bump commit is merged with the main branch.

Contents

• Methods to facilitate cloud computing
• Helper functions for Hail Batch jobs
• Cloning git repositories inside Hail Batch jobs