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A simple utility to convert cryosparc particle positions to relion star format.

Project description

cs2star.py

A simple utility that wraps around csparc2star.py to convert particle positions from Cryosparc JOB directories into a RELION-ready directory. On top of what csparc2star.py already does, this script automatically symlinks (or copies) the .mrc files, renaming them as appropriate to mrcs and updating the rlnMicrographName column to reflect the change.

Usage

cs2star.py particle_positions_job_directory [destination_directory]

A couple more options are available, check out the help page with -h.

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