GUI to visualize and process variant data
Project description
Cutevariant
cutevariant is a light standalone viewer of genetic variation written in Python for Qt. It allows you to view and filter VCF and other format files.
Installation
pip install cutevariant # install
cutevariant # run
.
To get tests running
git clone git@github.com:labsquare/cutevariant.git
cd cutevariant
virtualenv -p /usr/bin/python3 venv
source venv/bin/activate
make install_deps # install
make install # pip install -e .
make run # start application
make test # start tests
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