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A user-friend widget for Jupyter that accepts a Cytoscape file and visualizes the network

Project description

cywidget

cywidget is user-friend widget for JupyterLab that accepts a Cytoscape file and visualizes the network

igv-jupyter is tool for JupyterLab which wraps igv.js and integrates with g2nb. With this tool you can render igv.js in a cell and call its API from a user-friendly web form in the notebook. Track data can be loaded from local or remote URLs, or supplied directly.

For programmatic access to Cytoscape in a Jupyter notebook, see cy-jupyterlab.

Installation

Requirements:

  • python >= 3.7
  • jupyterlab >= 3.0
  • cy-jupyterlab
pip install cywidget

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