A deep-learning method for detecting DNA methylation state from Oxford Nanopore sequencing reads of plants
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0.1.4
0.1.3
add ranger optimizer and modify train module,
fix Queue.qsize() NotImplementedError in macOS partially, however call_mods in CUDA mode in macOS still doesn’t work,
add init_model option in train module
0.1.2
change imports in ref_reader,
change requirements,
fix and modify denoise module,
fix MKL_THREADING_LAYER error temporarily,
add –region option,
a combined 5mC model replacing CG/CHG/CHH models
0.1.1
fix bug and optimize call_mods without GPU, add call_freq funciton
0.1.0
Release the first vesrion of deepsignal-plant package
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