deepsynth-gitract

Generate deepsynth-gitract images.

Installation

Use the package manager pip to install deepsynth-gitract.

pip install deepsynth-gitract

Usage

Run on CPU (default setting)

TBA - You have to have a NVIDIA GPU to run this package. We are working on CPU version.

Run on GPU - generation process

import deepsynth_gitract

deepsynth_gitract.generate(name, result_dir, checkpoint_dir, num_img_per_tile, num_of_outputs, trunc_psi=0.75):
    """ Generate deepsynth Gastrointestinal tract images.

    Keyword arguments:
    name -- Any name to keep trac of generations
    result_dir -- A directory to save output
    checkpoint_dir -- A directory to download pre-trained checkpoints
    num_img_per_tile -- Number of images per dimenstion of the grid
    num_of_outputs -- Number of outputs to generate
    trunc_psi -- value between 0.5 and 1.0 (default 0.75)
    """

Run on GPU - to generate interpolations between random points

deepsynth_gitract.generate_interpolation(name, result_dir, checkpoint_dir, num_img_per_tile, num_of_outputs, num_of_steps_to_interpolate, save_frames, trunc_psi=0.75):
    """ Generate deepsynth Gastrointestinal tract images.

    Keyword arguments:
    name -- Any name to keep trac of generations
    result_dir -- A directory to save output
    checkpoint_dir -- A directory to download pre-trained checkpoints
    num_img_per_tile -- Number of images per dimenstion of the grid
    num_of_outputs -- Number of outputs to generate
    num_of_steps_to_interpolate -- Number of step between two random points
    save_frames -- True if you want frame by frame, otherwise .gif will be generated
    trunc_psi -- value between 0.5 and 1.0 (default 0.75)
    """

Contributing

Pull requests are welcome. For major changes, please open an issue first to discuss what you would like to change.

Please make sure to update tests as appropriate.

For more details:

Please contact: vajira@simula.no, michael@simula.no

License

MIT