Skip to main content

Simple dF/F calculation for neural calcium traces

Project description

dff_calc
========

.. image:: https://img.shields.io/pypi/v/dff_calc.svg
:target: https://pypi.python.org/pypi/dff_calc
:alt: Latest PyPI version

.. image:: https://travis-ci.org.png
:target: https://travis-ci.org
:alt: Latest Travis CI build status

Simple dF/F calculation for neural calcium traces

Usage
-----
1. ``from dff_calc.df_f_calculation import DffCalculator``
2. Create an instance with an two-dimensional array, the rows being individual traces. Other parameters are
documented in the code.
3. Call ``.calc()`` on that instance. The returned array contains the calculated dF/F values.

Installation
------------
``pip install dff-calc``

Requirements
^^^^^^^^^^^^
Python 3.6+, numpy, pandas

Licence
-------

MIT

Authors
-------

`dff_calc` was written by `Hagai Har-Gil <hagaihargil@protonmail.com>`_, graduate student in `Dr. Pablo Blinder's Lab. <pblab.tau.ac.il/en>`_


Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

dff_calc-0.1.2.tar.gz (2.9 kB view details)

Uploaded Source

Built Distribution

dff_calc-0.1.2-py3-none-any.whl (5.0 kB view details)

Uploaded Python 3

File details

Details for the file dff_calc-0.1.2.tar.gz.

File metadata

  • Download URL: dff_calc-0.1.2.tar.gz
  • Upload date:
  • Size: 2.9 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No

File hashes

Hashes for dff_calc-0.1.2.tar.gz
Algorithm Hash digest
SHA256 d52d35438660af5284f5bbac39aef8506aa44429c929fbb2fe74d51e2070a49f
MD5 80d466812b4d17ee8ec58510df40dc97
BLAKE2b-256 771aff1d410bb13ab2f3f3a1a16eef2fa6113ae82bf4493974469916bcd0f6fa

See more details on using hashes here.

File details

Details for the file dff_calc-0.1.2-py3-none-any.whl.

File metadata

File hashes

Hashes for dff_calc-0.1.2-py3-none-any.whl
Algorithm Hash digest
SHA256 2bd3657a7f855792a5ed749e271bcc9207309a105d758ed7f2262345f16f0d99
MD5 2e69cb543d14ac58dfe8d55b8b01f017
BLAKE2b-256 fad987f29978b692dc4422bb8b79a56195632520e7c04e2b02b52e824f0c64e9

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page