Simple dF/F calculation for neural calcium traces
Project description
dff_calc
========
.. image:: https://img.shields.io/pypi/v/dff_calc.svg
:target: https://pypi.python.org/pypi/dff_calc
:alt: Latest PyPI version
.. image:: https://travis-ci.org.png
:target: https://travis-ci.org
:alt: Latest Travis CI build status
Simple dF/F calculation for neural calcium traces
Usage
-----
1. ``from dff_calc.df_f_calculation import DffCalculator``
2. Create an instance with an two-dimensional array, the rows being individual traces. Other parameters are
documented in the code.
3. Call ``.calc()`` on that instance. The returned array contains the calculated dF/F values.
Installation
------------
``pip install dff-calc``
Requirements
^^^^^^^^^^^^
Python 3.6+, numpy, pandas
Licence
-------
MIT
Authors
-------
`dff_calc` was written by `Hagai Har-Gil <hagaihargil@protonmail.com>`_, graduate student in `Dr. Pablo Blinder's Lab. <pblab.tau.ac.il/en>`_
========
.. image:: https://img.shields.io/pypi/v/dff_calc.svg
:target: https://pypi.python.org/pypi/dff_calc
:alt: Latest PyPI version
.. image:: https://travis-ci.org.png
:target: https://travis-ci.org
:alt: Latest Travis CI build status
Simple dF/F calculation for neural calcium traces
Usage
-----
1. ``from dff_calc.df_f_calculation import DffCalculator``
2. Create an instance with an two-dimensional array, the rows being individual traces. Other parameters are
documented in the code.
3. Call ``.calc()`` on that instance. The returned array contains the calculated dF/F values.
Installation
------------
``pip install dff-calc``
Requirements
^^^^^^^^^^^^
Python 3.6+, numpy, pandas
Licence
-------
MIT
Authors
-------
`dff_calc` was written by `Hagai Har-Gil <hagaihargil@protonmail.com>`_, graduate student in `Dr. Pablo Blinder's Lab. <pblab.tau.ac.il/en>`_
Project details
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
dff_calc-0.1.2.tar.gz
(2.9 kB
view details)
Built Distribution
File details
Details for the file dff_calc-0.1.2.tar.gz
.
File metadata
- Download URL: dff_calc-0.1.2.tar.gz
- Upload date:
- Size: 2.9 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 |
d52d35438660af5284f5bbac39aef8506aa44429c929fbb2fe74d51e2070a49f
|
|
MD5 |
80d466812b4d17ee8ec58510df40dc97
|
|
BLAKE2b-256 |
771aff1d410bb13ab2f3f3a1a16eef2fa6113ae82bf4493974469916bcd0f6fa
|
File details
Details for the file dff_calc-0.1.2-py3-none-any.whl
.
File metadata
- Download URL: dff_calc-0.1.2-py3-none-any.whl
- Upload date:
- Size: 5.0 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 |
2bd3657a7f855792a5ed749e271bcc9207309a105d758ed7f2262345f16f0d99
|
|
MD5 |
2e69cb543d14ac58dfe8d55b8b01f017
|
|
BLAKE2b-256 |
fad987f29978b692dc4422bb8b79a56195632520e7c04e2b02b52e824f0c64e9
|