dict-minimize 0.0.4

Access scipy optimizers from your favorite deep learning framework.

The Dict Minimize Package

Access scipy optimizers from your favorite deep learning framework.

Installation

Only Python>=3.6 is officially supported, but older versions of Python likely work as well.

The core package itself can be installed with:

pip install dict_minimize

To also get the dependencies for all the supported frameworks (torch, JAX, tensorflow) in the README install with

pip install dict_minimize[framework]

See the GitHub, PyPI, and Read the Docs.

Example Usage

In these examples we optimize a modified Rosenbrock function. However, the arguments have been split into two chunks and stored as two entries in a dictionary. This is to illustrate how this package optimizes dictionaries of (tensor) parameters rather then vectors. We also pass in an extra shift argument to demonstrate how minimize allows extra constant arguments to be passed into the objective.

PyTorch

import torch
from dict_minimize.torch_api import minimize

def rosen_obj(params, shift):
    """Based on augmented Rosenbrock from botorch."""
    X, Y = params["x_half_a"], params["x_half_b"]
    X = X - shift
    Y = Y - shift
    obj = 100 * (X[1] - X[0] ** 2) ** 2 + 100 * (Y[1] - Y[0] ** 2) ** 2
    return obj

def d_rosen_obj(params, shift):
    obj = rosen_obj(params, shift=shift)
    da, db = torch.autograd.grad(obj, [params["x_half_a"], params["x_half_b"]])
    d_obj = OrderedDict([("x_half_a", da), ("x_half_b", db)])
    return obj, d_obj

torch.manual_seed(123)

n_a = 2
n_b = 2
shift = -1.0

params = OrderedDict([("x_half_a", torch.randn((n_a,))), ("x_half_b", torch.randn((n_b,)))])

params = minimize(d_rosen_obj, params, args=(shift,), method="L-BFGS-B", options={"disp": True})

TensorFlow

import tensorflow as tf
from dict_minimize.tensorflow_api import minimize

def rosen_obj(params, shift):
    """Based on augmented Rosenbrock from botorch."""
    X, Y = params["x_half_a"], params["x_half_b"]
    X = X - shift
    Y = Y - shift
    obj = 100 * (X[1] - X[0] ** 2) ** 2 + 100 * (Y[1] - Y[0] ** 2) ** 2
    return obj

def d_rosen_obj(params, shift):
    with tf.GradientTape(persistent=True) as t:
        t.watch(params["x_half_a"])
        t.watch(params["x_half_b"])

        obj = rosen_obj(params, shift=shift)

    da = t.gradient(obj, params["x_half_a"])
    db = t.gradient(obj, params["x_half_b"])
    d_obj = OrderedDict([("x_half_a", da), ("x_half_b", db)])
    del t  # Explicitly drop the reference to the tape
    return obj, d_obj

tf.random.set_seed(123)

n_a = 2
n_b = 2
shift = -1.0

params = OrderedDict([("x_half_a", tf.random.normal((n_a,))), ("x_half_b", tf.random.normal((n_b,)))])

params = minimize(d_rosen_obj, params, args=(shift,), method="L-BFGS-B", options={"disp": True})

NumPy

import numpy as np
from scipy.optimize import rosen, rosen_der
from dict_minimize.numpy_api import minimize

def rosen_obj(params, shift):
    val = rosen(params["x_half_a"] - shift) + rosen(params["x_half_b"] - shift)

    dval = OrderedDict(
        [
            ("x_half_a", rosen_der(params["x_half_a"] - shift)),
            ("x_half_b", rosen_der(params["x_half_b"] - shift)),
        ]
    )
    return val, dval

np.random.seed(0)

n_a = 3
n_b = 5
shift = -1.0

params = OrderedDict([("x_half_a", np.random.randn(n_a)), ("x_half_b", np.random.randn(n_b))])

params = minimize(rosen_obj, params, args=(shift,), method="L-BFGS-B", options={"disp": True})

JAX

from jax import random, value_and_grad
import jax.numpy as np
from dict_minimize.jax_api import minimize

def rosen(x):
    r = np.sum(100.0 * (x[1:] - x[:-1] ** 2.0) ** 2.0 + (1 - x[:-1]) ** 2.0, axis=0)
    return r

def rosen_obj(params, shift):
    val = rosen(params["x_half_a"] - shift) + rosen(params["x_half_b"] - shift)
    return val

n_a = 3
n_b = 5
shift = -1.0

# Jax makes it this simple:
d_rosen_obj = value_and_grad(rosen_obj, argnums=0)

# Setup randomness in JAX
key = random.PRNGKey(0)
key, subkey_a = random.split(key)
key, subkey_b = random.split(key)

params = OrderedDict(
    [("x_half_a", random.normal(subkey_a, shape=(n_a,))), ("x_half_b", random.normal(subkey_b, shape=(n_b,)))]
)

params = minimize(d_rosen_obj, params, args=(shift,), method="L-BFGS-B", options={"disp": True})

Contributing

The following instructions have been tested with Python 3.7.4 on Mac OS (10.14.6).

Install in editable mode

First, define the variables for the paths we will use:

GIT=/path/to/where/you/put/repos
ENVS=/path/to/where/you/put/virtualenvs

Then clone the repo in your git directory $GIT:

cd $GIT
git clone https://github.com/twitter/dict_minimize.git

Inside your virtual environments folder $ENVS, make the environment:

cd $ENVS
virtualenv dict_minimize --python=python3.7
source $ENVS/dict_minimize/bin/activate

Now we can install the pip dependencies. Move back into your git directory and run

cd $GIT/dict_minimize
pip install -r requirements/base.txt
pip install -e .  # Install the package itself

Contributor tools

First, we need to setup some needed tools:

cd $ENVS
virtualenv dict_minimize_tools --python=python3.7
source $ENVS/dict_minimize_tools/bin/activate
pip install -r $GIT/dict_minimize/requirements/tools.txt

To install the pre-commit hooks for contributing run (in the dict_minimize_tools environment):

cd $GIT/dict_minimize
pre-commit install

To rebuild the requirements, we can run:

cd $GIT/dict_minimize

# Check if there any discrepancies in the .in files
pipreqs dict_minimize/core/ --diff requirements/base.in
pipreqs dict_minimize/ --diff requirements/frameworks.in
pipreqs tests/ --diff requirements/tests.in
pipreqs docs/ --diff requirements/docs.in

# Regenerate the .txt files from .in files
pip-compile-multi --no-upgrade

Generating the documentation

First setup the environment for building with Sphinx:

cd $ENVS
virtualenv dict_minimize_docs --python=python3.7
source $ENVS/dict_minimize_docs/bin/activate
pip install -r $GIT/dict_minimize/requirements/docs.txt

Then we can do the build:

cd $GIT/dict_minimize/docs
make all
open _build/html/index.html

Documentation will be available in all formats in Makefile. Use make html to only generate the HTML documentation.

Running the tests

The tests for this package can be run with:

cd $GIT/dict_minimize
./local_test.sh

The script creates an environment using the requirements found in requirements/test.txt. A code coverage report will also be produced in $GIT/dict_minimize/htmlcov/index.html.

Deployment

The wheel (tar ball) for deployment as a pip installable package can be built using the script:

cd $GIT/dict_minimize/
./build_wheel.sh

This script will only run if the git repo is clean, i.e., first run git clean -x -ff -d.

Links

The source is hosted on GitHub.

The documentation is hosted at Read the Docs.

Installable from PyPI.

License

This project is licensed under the Apache 2 License - see the LICENSE file for details.