Galaxy tool with the following aims:
digest DNA into fragments, produce FASTA output of that
plot restriction digests in easy to use SVG format
run “hypothetical gels” to help biologists understand the output of these fancy computer things
optimise restrictions with multiple genomes in order to easily determine enzymes for unique resetriction patterns
Running
python bin/digest_dna.py test.fa Bsp6I,Bsp13I,DseDI
History
0.1.0 (2015-03-16)
Finished implementation of graphics drawer
1 maintainer
Metadata
1 maintainer
Release files for dnadigest 0.1.2
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| dnadigest-0.1.2.tar.gz | 84.4 kB | Details |
Built distributions (wheels)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| dnadigest-0.1.2-py2.7.egg | Legacy Egg format | - | - | Details |
| dnadigest-0.1.2-py2-none-any.whl | Python 2 | none | any | Details |
Total release size: 201.7 kB
Release files / dnadigest-0.1.2.tar.gz
| Download URL | dnadigest-0.1.2.tar.gz |
|---|---|
| Size | 84.4 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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Release files / dnadigest-0.1.2-py2.7.egg
| Download URL | dnadigest-0.1.2-py2.7.egg |
|---|---|
| Size | 60.2 kB |
| Tags | Egg |
|
SHA-256 checksum How to use checksums |
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Release files / dnadigest-0.1.2-py2-none-any.whl
| Download URL | dnadigest-0.1.2-py2-none-any.whl |
|---|---|
| Size | 57.1 kB |
| Tags | Python 2 |
|
SHA-256 checksum How to use checksums |
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