My personal python utility library.
Project description
python-dohlee
My personal python library.
Installation
pip install dohlee
Examples
dohlee.plot
Plotting library. Provides simple ways to produce publication-ready plots.
dohlee.plot.mutation_signature
import dohlee.plot as plot; plot.set_style() # Sets plot styles.
ax = plot.get_axis(figsize=(20.4, 3.4))
plot.mutation_signature(data, ax=ax)
dohlee.plot.boxplot
ax = plot.get_axis(preset='wide', transpose=True)
plot.boxplot(data=iris, x='species', y='sepal_length', ax=ax)
dohlee.plot.histogram
ax = plot.get_axis(preset='wide')
plot.histogram(iris.sepal_length, bins=22, xlabel='Sepal Length', ylabel='Frequency', ax=ax)
dohlee.plot.frequency
ax = plot.get_axis(preset='wide')
plot.frequency(data, ax=ax, xlabel='Your numbers', ylabel='Frequency')
dohlee.plot.tsne
ax = plot.get_axis(preset='wide')
plot.tsne(
iris[['sepal_length', 'sepal_width', 'petal_length', 'petal_width']],
ax=ax,
s=5,
labels=iris['species']
)
Development
Since this package is updated as needed when I'm doing my research, the development process fits well with TDD cycle.
- When you feel a need to write frequently-used research workflow as a function, write rough tests so that you can be sure that the function you've implemented just meets your need. Write the name of test function as verbose as possible!
- Run test with following commands. By default, nosetests ignores runnable files while finding test scripts. --exe option revokes it.
nosetests --exe --with-coverage --cover-package=dohlee
OR
tox -e py35,py36
- When sufficient progress have been made, test if the package can be published.
tox
- If all tests are passed, distribute the package via PyPI.
python setup.py sdist
twine upload dist/dohlee-x.x.x.tar.gz
Project details
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