Ancestral sequence reconstruction using a tree structured Ornstein Uhlenbeck variational autoencoder
Reason this release was yanked:
old version
Project description
DRAUPNIR: "I am a very Beta version, do not use me"
##Requirements for tree inference:
IQ-Tree: http://www.iqtree.org/doc/Quickstart
conda install -c bioconda iqtree
RapidNJ: https://birc.au.dk/software/rapidnj
conda config --add channels bioconda
conda install rapidnj
##Requirements for patristic matrix construction
Install R and ape and TreeDist libraries
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
draupnir-0.0.18.tar.gz
(3.9 MB
view hashes)
Built Distribution
Close
Hashes for draupnir-0.0.18-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | a8fc7ce70a550d9e6da2d4b6d2db4a2e9947619f0d4e4b72f3c85ca9dc58c35d |
|
MD5 | e1d2ab5efa5f1f34b047b6518ef903bc |
|
BLAKE2b-256 | e61050608f922cd7d5affed9680e1f7cd297bacbc01bca83c77cd38b9d78dd4b |