Ancestral sequence reconstruction using a tree structured Ornstein Uhlenbeck variational autoencoder
Reason this release was yanked:
old version
Project description
DRAUPNIR: "I am a very Beta version, do not use me"
##Requirements for tree inference:
IQ-Tree: http://www.iqtree.org/doc/Quickstart
conda install -c bioconda iqtree
RapidNJ: https://birc.au.dk/software/rapidnj
conda config --add channels bioconda
conda install rapidnj
##Requirements for patristic matrix construction
Install R and ape and TreeDist libraries
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
draupnir-0.0.193.tar.gz
(3.9 MB
view hashes)
Built Distribution
Close
Hashes for draupnir-0.0.193-py3-none-any.whl
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 7484adab04d85c1df6a75bca68e217462ddee4ae55d216fe2636bd95a8b86c4d |
|
| MD5 | 9c1e1f0381ef3ba5e81d93f2ab9c364e |
|
| BLAKE2b-256 | f54a5d4a111aa1030e74d6bf38f4fb0b292e2eb0ff193aa278629967c7566fb7 |
