Skip to main content

DREEM solves RNA structure ensembles using chemical probing data

Project description

[![Build docs](https://github.com/rouskinlab/dreem/actions/workflows/documentation.yml/badge.svg)](https://github.com/rouskinlab/dreem/actions/workflows/documentation.yml) [![Run tests](https://github.com/rouskinlab/dreem/actions/workflows/tests.yaml/badge.svg?branch=main)](https://github.com/rouskinlab/dreem/actions/workflows/tests.yaml)

# DREEM

Prof. Silvi Rouskin’s [DREEM algorithm](https://www.nature.com/articles/s41586-020-2253-5).

## Installation

Installation instructions [here](https://rouskinlab.github.io/dreem/dreem/installation.html).

## Documentation

The documentation is available on [Github Pages](https://rouskinlab.github.io/dreem).

## Contributors

Yves Martin, Scott Grote, Matthew Allan, Albéric de Lajarte.

## For developers

Before pushing to main, ensure that the code passes the tests:

` pytest test/test_pipeline.py `

and that the docs compile:

` cd docs make html `

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

dreem-0.1.16.tar.gz (1.0 MB view details)

Uploaded Source

Built Distribution

dreem-0.1.16-py3-none-any.whl (1.1 MB view details)

Uploaded Python 3

File details

Details for the file dreem-0.1.16.tar.gz.

File metadata

  • Download URL: dreem-0.1.16.tar.gz
  • Upload date:
  • Size: 1.0 MB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.2 CPython/3.10.12

File hashes

Hashes for dreem-0.1.16.tar.gz
Algorithm Hash digest
SHA256 937be81804e6f13948624184b8d53eb28c3a1e596a9d7662f6afeb93652a6d27
MD5 a69731c002b21e7f0ce02812acf29145
BLAKE2b-256 88aad2aa5df79cfc70e06da8317dda919943f22eb2824b1b41f30c3e5d34b75f

See more details on using hashes here.

File details

Details for the file dreem-0.1.16-py3-none-any.whl.

File metadata

  • Download URL: dreem-0.1.16-py3-none-any.whl
  • Upload date:
  • Size: 1.1 MB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.2 CPython/3.10.12

File hashes

Hashes for dreem-0.1.16-py3-none-any.whl
Algorithm Hash digest
SHA256 af1443b2e9b2538d6fd88068857c5158ceb990f873e10fcae26c6822cbc9a167
MD5 832d1b7267da5406f4f166848415abef
BLAKE2b-256 431fda98813978124be77fff91cc812b8f5159c7d5ff6e971bf30c4039d6e7b1

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page