DRMAA interface for Slurm/SGE DRMs @ BioComputingUP lab
Project description
DRMAAtic-lib
Scheduling libraries for DRMAAtic @BioCompUP, wrapping the drmaa-python
library and adding the implementations
for Slurm and SGE.
Installation
pip install DRMAAtic-lib
This will also pull the drmaa-python
library. You can see the latest version of the library here.
Requirements
- Slurm or SGE installed
libslurm-dev
library for Slurm orgridengine-dev
for SGE, both downloadable with aptlibdrmaa
C bindings for Slurm or SGE- slurm-drmaa for Slurm
drmaa-python
python library
ENV variables
Set the env variables for the drmaa-python
library. With PyCharm you can set this env variables in the run configuration.
SGE
export SGE_ROOT=/path/to/gridengine
export SGE_CELL=default
SLURM
Set the path to the libdrmaa library C binding
export DRMAA_LIBRARY_PATH=/usr/lib/slurm-drmaa/libdrmaa.so
Project details
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Source Distribution
DRMAAtic-lib-1.0.7.tar.gz
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