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drosSRA builds a url for visualization of tracks based on user specified parameters (i.e. sex, tissue, cell type)

Project description

drosSRA Documentation Status

drosSRA builds a url containing all relevant GEO tracks based on one or more user specified parameters (i.e. sex, tissue, cell type)


To download and install the latest version of drosSRA:

pip install drosSRA


There are five possible flags that users can use to search for tracks of interest: PubMed ID (-p), sex (-s), developmental stage (-d), tissue (-t), and cell type (-c). For example, if you are interested in viewing all tracks with testis data:

>> drosSRA -t testis

Or, if you are interested in the intersection of two or more parameters,

>> drosSRA -d 'larval stage' -t CNS


This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.


0.4.1 (2018-10-24)

  • patch to fix deployment with travis

0.4.0 (2018-10-23)

  • Genome browser automatically opens to pita

0.3.0 (2018-10-22)

  • Rework of to handle multiple flags

0.2.0 (2018-10-16)

  • First release on PyPI. (0.1.0 got messed up)

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Files for drosSRA, version 0.4.5
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