dvc-utils 0.0.6

CLI for diffing DVC files at two commits (or one commit vs. current worktree), optionally passing both through another command first

dvc-utils

CLI for diffing DVC files, optionally passing both through another command first

• Installation
• Usage
  • dvc-diff
• Examples
  • Parquet file
    • Schema diff
    • Row diff
    • Row count diff

Installation

pip install dvc-utils

Usage

dvc-utils --help
# Usage: dvc-utils [OPTIONS] COMMAND [ARGS]...
#
# Options:
#   --help  Show this message and exit.
#
# Commands:
#   diff  Diff a DVC-tracked file at two commits (or one commit vs. current
#         worktree), optionally passing both through another command first

The single subcommand, dvc-utils diff, is also exposed directly as dvc-dff:

dvc-diff

dvc-diff --help
# Usage: dvc-diff [OPTIONS] [exec_cmd...] <path>
#
#   Diff a file at two commits (or one commit vs. current worktree), optionally
#   passing both through `cmd` first
#
#   Examples:
#
#   dvc-utils diff -r HEAD^..HEAD wc -l foo.dvc  # Compare the number of lines
#   (`wc -l`) in `foo` (the file referenced by `foo.dvc`) at the previous vs.
#   current commit (`HEAD^..HEAD`).
#
#   dvc-utils diff md5sum foo  # Diff the `md5sum` of `foo` (".dvc" extension is
#   optional) at HEAD (last committed value) vs. the current worktree content.
#
# Options:
#   -c, --color              Colorize the output
#   -r, --refspec TEXT       <commit 1>..<commit 2> (compare two commits) or
#                            <commit> (compare <commit> to the worktree)
#   -S, --no-shell           Don't pass `shell=True` to Python `subprocess`es
#   -U, --unified INTEGER    Number of lines of context to show (passes through
#                            to `diff`)
#   -v, --verbose            Log intermediate commands to stderr
#   -w, --ignore-whitespace  Ignore whitespace differences (pass `-w` to `diff`)
#   -x, --exec-cmd TEXT      Command(s) to execute before diffing; alternate
#                            syntax to passing commands as positional arguments
#   --help                   Show this message and exit.

Examples

Parquet file

See sample commands and output below for inspecting changes to a DVC-tracked Parquet file in a given commit.

Setup:

git clone https://github.com/hudcostreets/nj-crashes && cd nj-crashes # Clone + enter example repo
commit=c8ae28e  # Example commit that changed some DVC-tracked Parquet files
path=njdot/data/2001/NewJersey2001Accidents.pqt.dvc  # One of the changed files

Schema diff

Use parquet2json to observe schema changes to a Parquet file:

parquet_schema() {
    parquet2json "$1" schema
}
export -f parquet_schema
dvc-diff -r $commit^..$commit parquet_schema $path

Output

2d1
<   OPTIONAL BYTE_ARRAY Year (STRING);
8,10d6
<   OPTIONAL BYTE_ARRAY Crash Date (STRING);
<   OPTIONAL BYTE_ARRAY Crash Day Of Week (STRING);
<   OPTIONAL BYTE_ARRAY Crash Time (STRING);
14,17c10,13
<   OPTIONAL BYTE_ARRAY Total Killed (STRING);
<   OPTIONAL BYTE_ARRAY Total Injured (STRING);
<   OPTIONAL BYTE_ARRAY Pedestrians Killed (STRING);
<   OPTIONAL BYTE_ARRAY Pedestrians Injured (STRING);
---
>   OPTIONAL INT64 Total Killed;
>   OPTIONAL INT64 Total Injured;
>   OPTIONAL INT64 Pedestrians Killed;
>   OPTIONAL INT64 Pedestrians Injured;
20,21c16,17
<   OPTIONAL BYTE_ARRAY Alcohol Involved (STRING);
<   OPTIONAL BYTE_ARRAY HazMat Involved (STRING);
---
>   OPTIONAL BOOLEAN Alcohol Involved;
>   OPTIONAL BOOLEAN HazMat Involved;
23c19
<   OPTIONAL BYTE_ARRAY Total Vehicles Involved (STRING);
---
>   OPTIONAL INT64 Total Vehicles Involved;
29c25
<   OPTIONAL BYTE_ARRAY Mile Post (STRING);
---
>   OPTIONAL DOUBLE Mile Post;
47,48c43,44
<   OPTIONAL BYTE_ARRAY Latitude (STRING);
<   OPTIONAL BYTE_ARRAY Longitude (STRING);
---
>   OPTIONAL DOUBLE Latitude;
>   OPTIONAL DOUBLE Longitude;
51a48
>   OPTIONAL INT64 Date (TIMESTAMP(MICROS,false));

Here we can see that various date/time columns were consolidated, and several stringly-typed columns were converted to ints, floats, and booleans.

Row diff

Diff the first row of the Parquet file above (pretty-printed as JSON using jq), before and after the given commit:

pretty_print_first_row() {
    # Print first row of Parquet file as JSON, pretty-print with jq
    parquet2json "$1" cat -l 1 | jq .
}
export -f pretty_print_first_row
dvc-diff -r $commit^..$commit pretty_print_first_row $path

Output

2d1
<   "Year": "2001",
8,10d6
<   "Crash Date": "12/21/2001",
<   "Crash Day Of Week": "F",
<   "Crash Time": "1834",
14,17c10,13
<   "Total Killed": "0",
<   "Total Injured": "0",
<   "Pedestrians Killed": "0",
<   "Pedestrians Injured": "0",
---
>   "Total Killed": 0,
>   "Total Injured": 0,
>   "Pedestrians Killed": 0,
>   "Pedestrians Injured": 0,
20,21c16,17
<   "Alcohol Involved": "N",
<   "HazMat Involved": "N",
---
>   "Alcohol Involved": false,
>   "HazMat Involved": false,
23c19
<   "Total Vehicles Involved": "2",
---
>   "Total Vehicles Involved": 2,
29c25
<   "Mile Post": "",
---
>   "Mile Post": null,
47,48c43,44
<   "Latitude": "",
<   "Longitude": "",
---
>   "Latitude": null,
>   "Longitude": null,
51c47,48
<   "Reporting Badge No.": "830"
---
>   "Reporting Badge No.": "830",
>   "Date": "2001-12-21 18:34:00 +00:00"

This reflects the schema changes above.

Row count diff

parquet_row_count() {
    parquet2json "$1" rowcount
}
export -f parquet_row_count
dvc-diff -r $commit^..$commit parquet_row_count $path

This time we get no output; the given $commit didn't change the row count in the DVC-tracked Parquet file $path.