user-friendly pipeline for GWAS fine-mapping.

Navigation

Verified details

These details have been verified by PyPI
Maintainers
Avatar for Jianhua-Wang from gravatar.com Jianhua-Wang

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: MIT License (MIT)
  • Author: Jianhua Wang
  • Requires: Python >=3.8, <3.12
Classifiers

Project description

easyfinemap

pypi python Build Status codecov License: MIT PyPI download month Build Status

user-friendly pipeline for GWAS fine-mapping

Features

  • Prepare LD reference for fine-mapping
  • Standardize input summary statistics
  • Identify independent loci by distance, LD clumping, or conditional analysis
  • Fine-mapping with or without LD reference

Finemapping approaches

  • LD-free
    • aBF
  • LD-based
    • FINEMAP
    • CAVIARBF
    • PAINTOR

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for Jianhua-Wang from gravatar.com Jianhua-Wang

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: MIT License (MIT)
  • Author: Jianhua Wang
  • Requires: Python >=3.8, <3.12
Classifiers

Release history Release notifications | RSS feed

0.4.6

0.4.4

0.4.3

0.4.2

0.4.1

0.4.0

0.3.9

0.3.8

0.3.5

0.3.2

This version

0.2.6

0.2.5

0.2.4

0.2.3

0.2.1

0.2.0

0.1.4

0.1.3

0.1.2

0.1.1

0.0.5

0.0.4

0.0.3

0.0.2

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

easyfinemap-0.2.6.tar.gz (33.8 MB view hashes)

Uploaded Source

Built Distribution

easyfinemap-0.2.6-py3-none-any.whl (24.0 kB view hashes)

Uploaded Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page