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Find suitable EC numbers from enzyme names

Project description

EcFinder

EcFinder tries to find an EC number for an enzyme name using exact and fuzzy search.

It automatically downloads the EC data file from Expasy.

Installation

It can be installed using pip install ec_finder.

CLI

The CLI tool ec-find is provided by the package. The first time the tool is called from the command line, the enzyme data are downloaded from Expasy.

API

The first time that ec_finder is imported, the package data is downloaded from Expasy.

The ec_finder.update() function can be used to check if new enzyme data is avalaible at Expasy and, if so, download it and update the data.

The ec_finder.search() function is used for searching for an enzyme name.

Project details


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This version

0.1

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