Find suitable EC numbers from enzyme names
Project description
EcFinder
EcFinder tries to find an EC number for an enzyme name using exact and fuzzy search.
It automatically downloads the EC data file from Expasy.
Installation
It can be installed using pip install ec_finder
.
CLI
The CLI tool ec-find
is provided by the package.
The first time the tool is called from the command line, the enzyme
data are downloaded from Expasy.
API
The first time that ec_finder
is imported, the package
data is downloaded from Expasy.
The ec_finder.update()
function can be used to check if new
enzyme data is avalaible at Expasy and, if so, download it and update
the data.
The ec_finder.search()
function is used for searching
for an enzyme name.
Project details
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