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Electronic Health Record Analysis with Python.

Project description

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ehrapy overview



  • Exploratory and targeted analysis of Electronic Health Records
  • Quality control & preprocessing
  • Visualization & Exploration
  • Clustering & trajectory inference


You can install ehrapy via [pip] from [PyPI]:

$ pip install ehrapy


Please have a look at the Usage documentation and the tutorials.

import ehrapy as ep


Exploratory electronic health record analysis with ehrapy Lukas Heumos, Philipp Ehmele, Tim Treis, Julius Upmeier zu Belzen, Altana Namsaraeva, Nastassya Horlava, Vladimir A. Shitov, Xinyue Zhang, Luke Zappia, Rainer Knoll, Niklas J. Lang, Leon Hetzel, Isaac Virshup, Lisa Sikkema, Eljas Roellin, Fabiola Curion, Roland Eils, Herbert B. Schiller, Anne Hilgendorff, Fabian J. Theis medRxiv 2023.12.11.23299816; doi: .

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