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Engelmann's Libre fMRI Tools

Project description

elftools: Engelmann's Libre fMRI Tools

elftools is a python package that is intended to facilitate analysis of functional magnetic resonance imaging (fMRI) datasets.

Modules

jfmri: Access MRI/fMRI datasets from files of arbitrary format

jfmri (Just Files MRI Module) is an extension module that provides methods and classes to read MRI/fMRI data from binary files of arbitrary format into numpy arrays, and to write MRI/fMRI data from numpy arrays to binary files. The binary format is specified by the user via command-line arguments, allowing access to files of any format. There is additional support for reading from and writing to NIfTI-1 files.

jfview: View MRI/fMRI datasets

jfview (Just Files MRI Viewer) is a simple viewer that is intended for visualization of how MRI/fMRI datasets are stored on disk without automatically applying spatial transformations from the image header.

License

elftools is released under the revised (3-clause) BSD license. For details, see LICENSE.txt.

The NIfTI-1 file format specification and header file (nifti1.h) are available from the Neuroimaging Informatics Technology Initiative. nifti1.h has been released into the public domain.

Project details


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