emtools

Utilities for CryoEM data manipulation

These details have not been verified by PyPI

Project links

Project description

logo_image

emtools is a Python package with utilities for manipulating CryoEM images and metadata such as STAR files or SQLITE databases. It also contains other miscellaneous utils for processes handling and monitoring, among others.

The library is composed by several modules that provide mainly classes to perform certain operations.

For more detailed information check the documentation at:

https://3dem.github.io/emdocs/emtools/

Installation

pip install emtools

Or for development:

git clone git@github.com:3dem/emtools.git
pip install -e emtools/

Usage

Testing

python -m unittest emtools.tests.test_utils
python -m unittest emtools.tests.test_metadata
python -m unittest emtools.tests.test_pipeline

How to cite

Please cite the code repository DOI: xxx

Authors

Jose Miguel de la Rosa-Trevín, St.Jude Children’s Research Hospital, Memphis, TN

Project details

These details have not been verified by PyPI

Project links

Release history Release notifications | RSS feed

This version

0.1.3

Nov 14, 2024

0.1.2

Oct 18, 2024

0.1.1

Oct 4, 2024

0.1.0

Jul 1, 2024

0.0.11

Mar 3, 2024

0.0.10

Feb 23, 2024

0.0.8

Nov 9, 2023

0.0.7

Aug 8, 2023

0.0.6

Jul 13, 2023

0.0.5

Jul 13, 2023

0.0.4

Feb 9, 2023

0.0.3

Feb 9, 2023

0.0.2

Feb 8, 2023

0.0.0

Oct 20, 2022

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

emtools-0.1.3.tar.gz (68.3 kB view details)

Uploaded Nov 14, 2024 Source

Built Distribution

emtools-0.1.3-py3-none-any.whl (103.3 kB view details)

Uploaded Nov 14, 2024 Python 3

File details

Details for the file emtools-0.1.3.tar.gz.

File metadata

Download URL: emtools-0.1.3.tar.gz
Upload date: Nov 14, 2024
Size: 68.3 kB
Tags: Source
Uploaded using Trusted Publishing? No
Uploaded via: twine/5.1.1 CPython/3.8.18

File hashes

Hashes for emtools-0.1.3.tar.gz
Algorithm	Hash digest
SHA256	`1e7ebdeac4c210637fb6729713432e1c3946c1c46930160495011d78e6091c95`
MD5	`fe63ead3653ae54da433c61b6d9c6421`
BLAKE2b-256	`4c507fe42f68abe4858506df51aba27f94310e9c58885ef988cfbddf6f96f1bc`

See more details on using hashes here.

File details

Details for the file emtools-0.1.3-py3-none-any.whl.

File metadata

Download URL: emtools-0.1.3-py3-none-any.whl
Upload date: Nov 14, 2024
Size: 103.3 kB
Tags: Python 3
Uploaded using Trusted Publishing? No
Uploaded via: twine/5.1.1 CPython/3.8.18

File hashes

Hashes for emtools-0.1.3-py3-none-any.whl
Algorithm	Hash digest
SHA256	`2164f3be2119e4f5cac34b175a7c4fc765a7c041c3e1e2e615e564b7a2ced43f`
MD5	`8d423fbbdf67a934f1fd1731c41cd99e`
BLAKE2b-256	`fe88eebdbbd75933050114e35cb30cff179db92b29b7ca0ca30203c3203e5d25`