Ensembl Python general-purpose utils
Project description
Ensembl Python general-purpose utils
Centralise generic Python utils used by other project within Ensembl design to facilitate frequent tasks such as input file path checks, archive files IO manipulation or logging setup, among others.
For more information, please consult this repository's GitHub pages.
Getting Started
Basic installation
This library is publicly available in pypi.org so it can be easily installed with your favourite Python dependency and packaging management, e.g.
pip install ensembl-utils
Installing the development environment (with Python venv
)
If you want to install this library in editable mode, we suggest you to do so via Python's virtual environment module (venv):
python -m venv <VIRTUAL_ENVIRONMENT_NAME>
source <VIRTUAL_ENVIRONMENT_NAME>/bin/activate
git clone https://github.com/Ensembl/ensembl-utils.git
cd ensembl-utils
pip install -e .[cicd,dev,doc]
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